AMTR_s00011p00231930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.113

Description : Pheophytinase, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0005435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005435_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00231930
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT4G36530 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g018083 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g43543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10820 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g54023 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g03208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20752 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.20G060200.1 Ceric.20G060200 not classified & original description: pacid=50566415... 0.05 OrthoFinder output from all 47 species
Cre10.g456150 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g05022 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g09953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018934001 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04951 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g47620.1 LOC_Os02g47620 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g04690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g18117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_196209g0010 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp1g03260.1 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g28817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g23732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012002 No alias not classified & original description: CDS=408-1397 0.03 OrthoFinder output from all 47 species
Sam_g17144 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g062610.3.1 Solyc02g062610 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Spa_g21863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023325_P002 Zm00001e023325 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA

No InterPro domains available for this sequence

No external refs found!