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  5. AMTR_s00011p00239880

AMTR_s00011p00239880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.134

No description available


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00239880
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00026790 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g042687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37518.t1 Aspi01Gene37518 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37519.t2 Aspi01Gene37519 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G005900.1 Ceric.28G005900 not classified & original description: pacid=50570573... 0.03 OrthoFinder output from all 47 species
Dcu_g03582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011877001 No alias Universal stress protein A-like protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_20328 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g50840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_100052g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18127g0010 RD2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g02044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000709 No alias not classified & original description: CDS=1-528 0.02 OrthoFinder output from all 47 species
Sam_g08502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040676_P001 Zm00001e040676 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 40 77
No external refs found!