AMTR_s00012p00239930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.211

Description : UPF0161 protein At3g09310 OS=Arabidopsis thaliana


Gene families : OG0007455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007455_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00239930

Target Alias Description ECC score Gene Family Method Actions
Dde_g30396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g28878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016967 No alias not classified & original description: CDS=5-334 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002696 Membr_insert_effic_factor 72 131
No external refs found!