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  5. AMTR_s00012p00264420

AMTR_s00012p00264420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.360

Description : Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00264420
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00173940 evm_27.TU.AmTr_v1... Cell... 0.03 OrthoFinder output from all 47 species
AT5G11610 No alias Exostosin family protein 0.03 OrthoFinder output from all 47 species
AT5G20260 No alias Exostosin family protein 0.04 OrthoFinder output from all 47 species
AT5G33290 XGD1 xylogalacturonan deficient 1 0.03 OrthoFinder output from all 47 species
Ala_g05140 No alias xylogalacturonan xylosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G085000.1 Ceric.17G085000 not classified & original description: pacid=50618807... 0.03 OrthoFinder output from all 47 species
Dcu_g01304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012820001 No alias Cell... 0.03 OrthoFinder output from all 47 species
GSVIVT01035881001 No alias Cell... 0.03 OrthoFinder output from all 47 species
Gb_02074 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g07775 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429289g0020 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_125709g0010 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_61030g0010 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g12090.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g12100.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g13740.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g15860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g50510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58933 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27731 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g045120.2.1 Solyc07g045120 xylogalacturonan xylosyltransferase 0.04 OrthoFinder output from all 47 species
Solyc08g066690.4.1 Solyc08g066690 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g062940.3.1 Solyc12g062940 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g51812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015098_P001 Zm00001e015098 xylogalacturonan xylosyltransferase 0.03 OrthoFinder output from all 47 species
Zm00001e036361_P001 Zm00001e036361 xylogalacturonan xylosyltransferase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004263 Exostosin 209 273
IPR004263 Exostosin 3 148
No external refs found!