AMTR_s00013p00046010 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.10

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.gamma subunit

Gene families : OG0005806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005806_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00013p00046010
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AT3G48570	No alias	secE/sec61-gamma protein transport protein	0.05	OrthoFinder output from all 47 species
Ceric.17G004100.1	Ceric.17G004100	subunit gamma of co-translational insertion system Sec61...	0.03	OrthoFinder output from all 47 species
GSVIVT01033084001	No alias	Protein translocation.endoplasmic...	0.08	OrthoFinder output from all 47 species
MA_10431451g0010	No alias	subunit gamma of co-translational insertion system Sec61...	0.02	OrthoFinder output from all 47 species
Smo228208	No alias	Protein translocation.endoplasmic...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006605	protein targeting	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0070003	threonine-type peptidase activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001901	Translocase_SecE/Sec61-g	12	66

External Links

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