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  5. AMTR_s00013p00055400

AMTR_s00013p00055400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.18

No description available


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00055400

Target Alias Description ECC score Gene Family Method Actions
AT2G35540 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g058078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07957 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g02654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G052600.1 Ceric.08G052600 not classified & original description: pacid=50638471... 0.03 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.06 OrthoFinder output from all 47 species
Ceric.1Z097000.1 Ceric.1Z097000 not classified & original description: pacid=50640979... 0.02 OrthoFinder output from all 47 species
Dcu_g04874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07712 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013048001 No alias No description available 0.1 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g30620.3 LOC_Os02g30620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34440.1 LOC_Os06g34440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g01381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g15554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g08458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098250.4.1 Solyc01g098250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc08g029220.3.1 Solyc08g029220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g20600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025632_P001 Zm00001e025632 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025633_P001 Zm00001e025633 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e041002_P001 Zm00001e041002 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 66 127
IPR024593 DUF3444 533 745
No external refs found!