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  5. AMTR_s00013p00061220

AMTR_s00013p00061220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.24

Description : Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00061220
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT5G14120 No alias Major facilitator superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g018602 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04964 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13265 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25147 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24782.t1 Aspi01Gene24782 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39644.t1 Aspi01Gene39644 UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51117.t1 Aspi01Gene51117 UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17230 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07016 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008083001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01012864001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_04760 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
LOC_Os03g58580.1 LOC_Os03g58580 anion transporter (Fabaceae-N70) 0.05 OrthoFinder output from all 47 species
LOC_Os04g42420.1 LOC_Os04g42420 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Lfl_g31227 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_18517g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_2615g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Ore_g17470 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo111826 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc10g083940.1.1 Solyc10g083940 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
Tin_g32042 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40087 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005267_P001 Zm00001e005267 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Zm00001e006026_P001 Zm00001e006026 anion transporter (Fabaceae-N70) 0.07 OrthoFinder output from all 47 species
Zm00001e006027_P001 Zm00001e006027 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 15 262
No external refs found!