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  5. AMTR_s00014p00234760

AMTR_s00014p00234760 (KCS4,...)


Aliases : KCS4, evm_27.TU.AmTr_v1.0_scaffold00014.95

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase


Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00234760
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT4G34520 FAE1, KCS18 3-ketoacyl-CoA synthase 18 0.04 OrthoFinder output from all 47 species
Adi_g060055 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g060067 KCS4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01207 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18484 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25500 KCS4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32758 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25719 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10179.t1 KCS11, Aspi01Gene10179 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25128.t1 KCS4, Aspi01Gene25128 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0132.g049256 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1740 0.03 OrthoFinder output from all 47 species
Azfi_s0171.g055663 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1524 0.04 OrthoFinder output from all 47 species
Cba_g36809 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66417 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G120500.1 KCS9, Ceric.01G120500 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.35G031800.1 KCS4, Ceric.35G031800 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g42855 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22693 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035769001 KCS11 Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
LOC_Os10g07010.1 KCS1, LOC_Os10g07010 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
MA_10433600g0010 KCS20 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
MA_880820g0010 KCS20 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ore_g41434 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11720 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11820 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Smo75021 KCS11 Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
Solyc08g067410.2.1 KCS11, Solyc08g067410 3-ketoacyl-CoA synthase (KCS) 0.05 OrthoFinder output from all 47 species
Solyc09g083050.3.1 KCS20, Solyc09g083050 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Spa_g16956 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 401 481
IPR013601 FAE1_typ3_polyketide_synth 95 384
No external refs found!