AMTR_s00014p00234840 (KCS4,...)

Aliases : KCS4, evm_27.TU.AmTr_v1.0_scaffold00014.98

Description : 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana

Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00014p00234840

Target	Alias	Description	ECC score	Gene Family Method
AT4G34520	FAE1, KCS18	3-ketoacyl-CoA synthase 18	0.02	OrthoFinder output from all 47 species
Aob_g25719	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g07780	KCS11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32729.t1	KCS4, Aspi01Gene32729	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene46251.t1	KCS9, Aspi01Gene46251	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60437.t1	KCS10, FDH,...	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene62724.t1	KCS4, Aspi01Gene62724	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene70728.t1	KCS10, FDH,...	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0082.g038722	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1428	0.02	OrthoFinder output from all 47 species
Ceric.38G004900.1	KCS20, Ceric.38G004900	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.02	OrthoFinder output from all 47 species
Dcu_g05686	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10605g0020	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Pnu_g11820	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g26106	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c12_23800V3.1	KCS11, Pp3c12_23800	3-ketoacyl-CoA synthase 11	0.01	OrthoFinder output from all 47 species
Pp3c4_2960V3.1	KCS4, Pp3c4_2960	3-ketoacyl-CoA synthase 4	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003045	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1632	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018272	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1998	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0219.g026131	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1512	0.02	OrthoFinder output from all 47 species
Sam_g27491	No alias	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc06g053900.4.1	KCS11, Solyc06g053900	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
Zm00001e038586_P001	KCS1, Zm00001e038586	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	1	37

External Links

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AMTR_s00014p00234840 (KCS4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation