Aliases : RAN1, RAN-1, ATRAN1, evm_27.TU.AmTr_v1.0_scaffold00016.94
Description : Protein translocation.nucleus.nucleocytoplasmic transport.Ran GTPase
Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00016p00135360 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g002593 | RAN1, RAN-1, ATRAN1 | GTPase *(Ran) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16328 | RAN2 | GTPase *(Ran) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05381 | RAN3, ATRAN3 | GTPase *(Ran) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03747 | RAN1, RAN-1, ATRAN1 | GTPase *(Ran) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08488 | RAN2 | GTPase *(Ran) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08919 | RAN1, RAN-1, ATRAN1 | GTPase *(Ran) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035805001 | RAN2 | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g49890.1 | RAN3, ATRAN3,... | Ran GTPase | 0.02 | OrthoFinder output from all 47 species | |
| Len_g10671 | RAN3, ATRAN3 | GTPase *(Ran) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_5657g0020 | RAN1, RAN-1, ATRAN1 | Ran GTPase | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g12503 | RAN1, RAN-1, ATRAN1 | GTPase *(Ran) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24081 | RAN1, RAN-1, ATRAN1 | GTPase *(Ran) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c20_18280V3.1 | RAN2, Pp3c20_18280 | RAN GTPase 3 | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g01897 | RAN1, RAN-1, ATRAN1 | GTPase *(Ran) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005525 | GTP binding | IEA | Interproscan |
| BP | GO:0007264 | small GTPase mediated signal transduction | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001806 | Small_GTPase | 23 | 179 |
| No external refs found! |
