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  5. AMTR_s00016p00143640

AMTR_s00016p00143640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.99

Description : Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica


Gene families : OG0001219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001219_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00143640

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene70214.t1 DRIP2, Aspi01Gene70214 modification writer component *(BMI1) of modification... 0.02 OrthoFinder output from all 47 species
Gb_00899 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g43360.2 DRIP2, LOC_Os03g43360 modification writer component BMI1 of modification... 0.03 OrthoFinder output from all 47 species
LOC_Os04g32510.1 LOC_Os04g32510 Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_104546g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5126g0010 No alias Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Smo438486 DRIP2 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Zm00001e018751_P005 Zm00001e018751 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!