1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00016p00196760

AMTR_s00016p00196760 (VNI2, NAC083,...)


Aliases : VNI2, NAC083, ANAC083, evm_27.TU.AmTr_v1.0_scaffold00016.162

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor


Gene families : OG0000024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00196760

Target Alias Description ECC score Gene Family Method Actions
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.03 OrthoFinder output from all 47 species
AT5G13180 VNI2, NAC083, ANAC083 NAC domain containing protein 83 0.03 OrthoFinder output from all 47 species
Adi_g007378 anac078, NAC2 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113716 NAC025, anac025 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06435 FEZ, ANAC009 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11860 NARS1, NAC2,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16372 NAC094, anac094 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19716 ATNAC3, ANAC055,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23575 ATCUC2, ANAC098, CUC2 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25115 ANAC019, NAC019 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15579 NARS1, NAC2,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33274.t1 ATCUC2, ANAC098,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60892.t1 ANAC018, NAM,... NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010242 NAC053, anac053 NAC-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.02G064600.1 anac078, NAC2,... NAC-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G021000.1 anac078, NAC2,... NAC-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.32G060500.1 NAC025, anac025,... NAC-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g06475 anac078, NAC2 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19380 ATCUC2, ANAC098, CUC2 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24611 ANAC100, ATNAC5, NAC100 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05677 NAC053, anac053 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008839001 ANAC002, ATAF1 RNA biosynthesis.transcriptional activation.NAC... 0.04 OrthoFinder output from all 47 species
GSVIVT01019952001 ATNAP, NAP, ANAC029 RNA biosynthesis.transcriptional activation.NAC... 0.03 OrthoFinder output from all 47 species
LOC_Os03g42630.1 anac058, NAC058,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
LOC_Os03g60080.1 anac081, ATAF2,... transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
LOC_Os05g34830.1 ANAC002, ATAF1,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
LOC_Os07g12340.1 NAC032, anac032,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Len_g11173 anac057, NAC057 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431189g0020 ANAC034, LOV1,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
MA_73369g0010 FEZ, ANAC009 transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Mp4g11910.1 anac057, NAC057 transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
Mp6g02590.1 ANAC100, ATNAC5, NAC100 transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
Msp_g13717 anac078, NAC2 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15316 NAC032, anac032 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09910 NARS1, NAC2,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16702 ATCUC2, ANAC098, CUC2 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31115 ATCUC2, ANAC098, CUC2 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00886 ANAC020, NAC020 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29103 ATNAP, NAP, ANAC029 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00666 ANAC019, NAC019 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26010 ANAC070, BRN2, NAC070 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010438 ANAC018, NAM,... NAC-type transcription factor & original description: CDS=457-921 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010470 ANAC054, ATNAC1, CUC1 NAC-type transcription factor & original description: CDS=1-813 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023754 ANAC018, NAM,... NAC-type transcription factor & original description: CDS=1-1032 0.03 OrthoFinder output from all 47 species
Solyc05g021090.4.1 NAC042, anac042,... transcription factor (NAC) 0.04 OrthoFinder output from all 47 species
Solyc07g045030.4.1 NAC042, anac042,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Solyc12g013620.2.1 RD26, ANAC072,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Spa_g42161 NAC094, anac094 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009384_P001 NAC032, anac032,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Zm00001e012982_P001 anac021, NAC1,... transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
Zm00001e019046_P002 ANAC002, ATAF1,... transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
Zm00001e019473_P001 anac081, ATAF2,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Zm00001e024028_P001 ANAC087, Zm00001e024028 transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Zm00001e028872_P002 NAC032, anac032,... transcription factor (NAC) 0.04 OrthoFinder output from all 47 species
Zm00001e030150_P001 NAC036, anac036,... transcription factor (NAC) 0.04 OrthoFinder output from all 47 species
Zm00001e035884_P001 ANAC087, Zm00001e035884 transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
Zm00001e036720_P002 EMB2749,... transcription factor (NAC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003441 NAC-dom 14 138
No external refs found!