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  5. AMTR_s00016p00225920

AMTR_s00016p00225920 (ATCYP20-2, CYP20-2,...)


Aliases : ATCYP20-2, CYP20-2, evm_27.TU.AmTr_v1.0_scaffold00016.208

Description : Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00225920
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT3G62030 ROC4 rotamase CYP 4 0.03 OrthoFinder output from all 47 species
AT5G13120 ATCYP20-2, CYP20-2 cyclophilin 20-2 0.04 OrthoFinder output from all 47 species
Ala_g12028 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13368 No alias EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012462 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=264-1001 0.02 OrthoFinder output from all 47 species
Azfi_s1227.g099989 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=45-827 0.02 OrthoFinder output from all 47 species
Cba_g08725 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12958 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z023700.1 CYP5, ATCYP5,... EC_5.2 cis-trans-isomerase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.32G051100.1 ATCYP20-2,... EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G026500.1 CYP5, ATCYP5,... EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.29 No alias Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.30 ROC5, ATCYP1 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cre06.g284900 CYP5, ATCYP5, CYP19-4 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Dde_g02039 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000919001 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
GSVIVT01028226001 ROC4 Protein modification.protein folding and quality... 0.09 OrthoFinder output from all 47 species
Gb_11317 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.04 OrthoFinder output from all 47 species
LOC_Os05g01270.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.06 OrthoFinder output from all 47 species
Len_g11459 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02684 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g15930.1 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.04 OrthoFinder output from all 47 species
Msp_g13678 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00741 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21010 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14494 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11717 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005017 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=32-877 0.05 OrthoFinder output from all 47 species
Solyc01g009990.3.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.04 OrthoFinder output from all 47 species
Spa_g14689 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025457_P001 ROC4, Zm00001e025457 protein folding catalyst 0.05 OrthoFinder output from all 47 species
Zm00001e027678_P001 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.03 OrthoFinder output from all 47 species
Zm00001e029710_P001 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
MF GO:0005343 organic acid:sodium symporter activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008508 bile acid:sodium symporter activity IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015125 bile acid transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP HCCA
MF GO:0015370 solute:sodium symporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140161 monocarboxylate:sodium symporter activity IEP HCCA
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 92 247
No external refs found!