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  5. AMTR_s00016p00239570

AMTR_s00016p00239570 (RBR, ATRBR1, RBR1,...)


Aliases : RBR, ATRBR1, RBR1, RB1, RB, evm_27.TU.AmTr_v1.0_scaffold00016.249

Description : Cell cycle.interphase.G1 phase.RB key regulator


Gene families : OG0002400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00239570

Target Alias Description ECC score Gene Family Method Actions
Adi_g111188 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species
Cba_g14459 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species
Dcu_g42453 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.04 OrthoFinder output from all 47 species
Ppi_g05934 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.05 OrthoFinder output from all 47 species
Solyc09g091280.4.1 RBR, ATRBR1,... cell cycle interphase key regulator 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0051726 regulation of cell cycle IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002719 RB_B 737 865
IPR024599 RB_N 96 234
IPR002720 RB_A 417 615
No external refs found!