1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00016p00245620

AMTR_s00016p00245620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.279

Description : Protein modification.protein folding and quality control.N-glycan-dependent machinery.CNX-CRT cycle.CNX lectin chaperone


Gene families : OG0001202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001202_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00245620

Target Alias Description ECC score Gene Family Method Actions
AT5G61790 CNX1, ATCNX1 calnexin 1 0.02 OrthoFinder output from all 47 species
Adi_g056898 CNX1, ATCNX1 membrane-anchored lectin chaperone *(CNX) & original... 0.03 OrthoFinder output from all 47 species
Adi_g056899 CNX1, ATCNX1 membrane-anchored lectin chaperone *(CNX) & original... 0.02 OrthoFinder output from all 47 species
Adi_g074279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074280 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g075418 CNX1, ATCNX1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44328 CNX1, ATCNX1 membrane-anchored lectin chaperone *(CNX) & original... 0.08 OrthoFinder output from all 47 species
Als_g57873 No alias membrane-anchored lectin chaperone *(CNX) & original... 0.03 OrthoFinder output from all 47 species
Aob_g01962 No alias membrane-anchored lectin chaperone *(CNX) & original... 0.02 OrthoFinder output from all 47 species
Ceric.38G034600.1 Ceric.38G034600 membrane-anchored lectin chaperone *(CNX) & original... 0.04 OrthoFinder output from all 47 species
Dac_g13444 No alias membrane-anchored lectin chaperone *(CNX) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11352 No alias membrane-anchored lectin chaperone *(CNX) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01005680001 CNX1, ATCNX1 Calnexin homolog OS=Helianthus tuberosus 0.05 OrthoFinder output from all 47 species
Len_g09690 No alias membrane-anchored lectin chaperone *(CNX) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g25363 CNX1, ATCNX1 membrane-anchored lectin chaperone *(CNX) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g41023 No alias membrane-anchored lectin chaperone *(CNX) & original... 0.05 OrthoFinder output from all 47 species
MA_10427968g0010 No alias lectin chaperone (CNX) 0.06 OrthoFinder output from all 47 species
Mp4g06370.1 No alias lectin chaperone (CNX) 0.03 OrthoFinder output from all 47 species
Nbi_g27538 No alias membrane-anchored lectin chaperone *(CNX) & original... 0.02 OrthoFinder output from all 47 species
Ore_g04092 No alias membrane-anchored lectin chaperone *(CNX) & original... 0.02 OrthoFinder output from all 47 species
Spa_g23497 CNX1, ATCNX1 membrane-anchored lectin chaperone *(CNX) & original... 0.03 OrthoFinder output from all 47 species
Spa_g48185 No alias membrane-anchored lectin chaperone *(CNX) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001580 Calret/calnex 25 381
No external refs found!