AMTR_s00016p00259710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.369

Description : Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00259710

Target Alias Description ECC score Gene Family Method Actions
Adi_g059907 No alias xylogalacturonan xylosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G107700.1 Ceric.02G107700 not classified & original description: pacid=50585308... 0.04 OrthoFinder output from all 47 species
Dac_g44401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g43160.1 LOC_Os06g43160 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g09479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_9984677g0010 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ore_g23570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021156 No alias not classified & original description: CDS=1221-3014 0.04 OrthoFinder output from all 47 species
Sam_g22996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g078450.3.1 Solyc08g078450 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g19376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR004263 Exostosin 133 382
No external refs found!