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  5. AMTR_s00017p00218450

AMTR_s00017p00218450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.161

Description : Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00218450
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00164370 XSP1,... Subtilisin-like protease SBT4.14 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00122p00027660 evm_27.TU.AmTr_v1... Subtilisin-like protease SBT3.12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aev_g06737 ATSBT1.3, SBT1.3 protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16158 SLP3 protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47285 ATSBT5.4, SBT5.4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23766 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20341 ARA12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G028800.1 Ceric.05G028800 protease *(SBT1) & original description: pacid=50577470... 0.03 OrthoFinder output from all 47 species
Dac_g05137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23125 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07116 SLP3 protease *(SBT2) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19771 XSP1 protease *(SBT4) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25884 No alias protease *(SBT4) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25887 XSP1 protease *(SBT4) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46714 No alias protease *(SBT4) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06067 No alias protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003689001 No alias Subtilisin-like protease SBT2.6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01004250001 ATSBT5.4, SBT5.4 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01009968001 ATSBT5.2 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01014788001 ATSBT5.4, SBT5.4 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01019899001 No alias Subtilisin-like protease SBT1.4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019901001 SDD1 Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024042001 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01024195001 No alias Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01026420001 ATSBT3.5, SBT3.5 Subtilisin-like protease SBT3.5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027583001 XSP1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os02g17000.1 LOC_Os02g17000 Subtilisin-like protease SBT3.9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g17060.1 SBT3.3,... Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g17080.1 LOC_Os02g17080 Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02750.1 SDD1, LOC_Os03g02750 Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g06290.1 ATSBT3.18,... protease (SBT3) 0.02 OrthoFinder output from all 47 species
LOC_Os04g47150.1 LOC_Os04g47150 Subtilisin-like protease SBT1.8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g36010.1 ARA12, LOC_Os05g36010 protease (SBT1) 0.02 OrthoFinder output from all 47 species
LOC_Os07g39020.1 LOC_Os07g39020 Subtilisin-like protease SBT1.8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g08100.1 SLP3 protease (SBT2) 0.02 OrthoFinder output from all 47 species
Mp6g12310.1 SLP3 protease (SBT2) 0.02 OrthoFinder output from all 47 species
Mp6g14210.1 No alias protease (SBT2) 0.03 OrthoFinder output from all 47 species
Mp8g07080.1 AIR3 protease (SBT5) 0.02 OrthoFinder output from all 47 species
Nbi_g06264 AIR3 protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16094 AIR3 protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10220 No alias protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09582 No alias protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Smo110049 No alias Subtilisin-like protease SBT3.4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo402550 ATSBT5.2 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Spa_g04703 ARA12 protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16506 AIR3 protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21100 No alias protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g43415 No alias protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15624 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008103_P001 ARA12, Zm00001e008103 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000209 Peptidase_S8/S53_dom 30 153
No external refs found!