AMTR_s00017p00239550 (ATH-A, CESA2,...)

Aliases : ATH-A, CESA2, ATCESA2, evm_27.TU.AmTr_v1.0_scaffold00017.211

Description : Cell wall.cellulose.synthesis.cellulose synthase complex (CSC).CSC components.CesA-type catalytic component

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00017p00239550

Target	Alias	Description	ECC score	Gene Family Method
AT4G18780	CESA8, LEW2,...	cellulose synthase family protein	0.02	OrthoFinder output from all 47 species
Adi_g011565	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082225	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Adi_g082474	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Adi_g112515	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g30902	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Als_g47693	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aop_g18284	MUR10, ATCESA7,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05157.t1	ATH-A, CESA2,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene30569.t1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aspi01Gene43165.t2	AtCESA1, RSW1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aspi01Gene58191.t1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Azfi_s0004.g008840	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: CDS=44-3832	0.03	OrthoFinder output from all 47 species
Azfi_s0323.g064541	ATCSLD4, CSLD4	mannan synthase *(CSLD) & original description: CDS=673-2634	0.03	OrthoFinder output from all 47 species
Dcu_g13415	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Dcu_g38706	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Dde_g31832	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ehy_g18189	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01028071001	ATCSLD5, CSLD5, SOS6	Cellulose synthase-like protein D5 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_32651	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
MA_10434525g0010	ATH-A, CESA2, ATCESA2	Probable cellulose synthase A catalytic subunit 5...	0.05	OrthoFinder output from all 47 species
Msp_g48239	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Nbi_g25978	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Nbi_g26244	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ore_g16020	AtCESA1, RSW1, CESA1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g18791	MUR10, ATCESA7,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g22252	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Smo83878	ATCSLD3, KJK, CSLD3	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
Solyc09g075550.3.1	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Tin_g05658	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Tin_g06669	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g21851	CESA6, PRC1, IXR2, E112	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Zm00001e006290_P001	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	359	1079

External Links

No external refs found!

AMTR_s00017p00239550 (ATH-A, CESA2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation