AMTR_s00017p00247550 (KIWI,...)

Aliases : KIWI, evm_27.TU.AmTr_v1.0_scaffold00017.238

Description : RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana

Gene families : OG0001404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001404_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00017p00247550

Target	Alias	Description	ECC score	Gene Family Method
Adi_g010168	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
LOC_Os02g34840.1	KIWI, LOC_Os02g34840	RNA polymerase II transcriptional coactivator KIWI...	0.04	OrthoFinder output from all 47 species
Mp2g17130.1	KIWI	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Pir_g45208	KELP	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
Spa_g29953	KELP	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003712	transcription coregulator activity	None	Extended
MF	GO:0003713	transcription coactivator activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003173	PC4_C	29	103

External Links

No external refs found!

AMTR_s00017p00247550 (KIWI,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation