1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00018p00252240

AMTR_s00018p00252240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.162

Description : Probable L-gulonolactone oxidase 6 OS=Arabidopsis thaliana


Gene families : OG0000286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00252240

Target Alias Description ECC score Gene Family Method Actions
AT2G46750 No alias D-arabinono-1,4-lactone oxidase family protein 0.03 OrthoFinder output from all 47 species
Adi_g003075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g041925 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Adi_g105218 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Adi_g125668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33689 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Als_g36641 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Aop_g11279 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18398.t1 Aspi01Gene18398 L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene69235.t1 Aspi01Gene69235 L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G042100.1 Ceric.30G042100 L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Dac_g20360 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Dac_g46473 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11224 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Gb_14797 No alias L-gulonolactone oxidase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_24045 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_24047 No alias Probable L-gulonolactone oxidase 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10430295g0020 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_123068g0010 No alias Probable L-gulonolactone oxidase 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_163876g0010 No alias Probable L-gulonolactone oxidase 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_47198g0010 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp5g05600.1 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g30714 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Pir_g22643 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007857 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e021853_P001 Zm00001e021853 L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEA Interproscan
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007173 ALO_C 396 527
IPR006094 Oxid_FAD_bind_N 59 190
No external refs found!