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  5. AMTR_s00019p00039340

AMTR_s00019p00039340 (MRS2-1, MGT2,...)


Aliases : MRS2-1, MGT2, evm_27.TU.AmTr_v1.0_scaffold00019.18

Description : Solute transport.channels.CorA family.MRS/MGT metal cation transporter


Gene families : OG0000346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00039340
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Adi_g006893 MGT6, MRS2-4 metal cation transporter *(MRS/MGT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52438.t2 MRS2-1, MGT2,... metal cation transporter *(MRS/MGT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01925 MGT4, MRS2-3 metal cation transporter *(MRS/MGT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07480 MGT4, MRS2-3 metal cation transporter *(MRS/MGT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28671 No alias metal cation transporter *(MRS/MGT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo91491 ATMGT9, MGT9, MRS2-2 Solute transport.channels.CorA family.MRS/MGT metal... 0.03 OrthoFinder output from all 47 species
Zm00001e007661_P001 MRS2-1, MGT2,... metal cation transporter (MRS/MGT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!