1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00019p00070230

AMTR_s00019p00070230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.48

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL35 component


Gene families : OG0006536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006536_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00070230

Target Alias Description ECC score Gene Family Method Actions
AT2G24090 No alias Ribosomal protein L35 0.07 OrthoFinder output from all 47 species
Aev_g12788 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g18112 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g00423 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.15G044500.1 Ceric.15G044500 component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cre04.g217932 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Dcu_g43056 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g06179 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g03085 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os06g43900.1 LOC_Os06g43900 component psRPL35 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g09835 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
MA_181338g0010 No alias component psRPL35 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp5g05850.1 No alias component psRPL35 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Nbi_g30018 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c22_13420V3.1 Pp3c22_13420 Ribosomal protein L35 0.04 OrthoFinder output from all 47 species
Ppi_g18684 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014110 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g19900 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc07g006000.3.1 Solyc07g006000 component psRPL35 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Spa_g24771 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e037448_P001 Zm00001e037448 component psRPL35 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR021137 Ribosomal_L35 77 123
No external refs found!