Aliases : At-RSZ22a, RSZ22a, evm_27.TU.AmTr_v1.0_scaffold00019.143
Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor
Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G23860 | RSZ21, At-RSZ21,... | RS-containing zinc finger protein 21 | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04168 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g22485 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03230 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g25385 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene17745.t1 | At-RSZ22a,... | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20627 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cre09.g408200 | At-RSZ22a, RSZ22a | RNA processing.RNA splicing.spliceosome-associated... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g06419 | RSZ21, At-RSZ21,... | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g36232 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g49551 | At-RSZ22a, RSZ22a | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07876 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19642 | RSZ21, At-RSZ21,... | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g06025 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g18145 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g66414 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10867 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13208 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g51937 | At-RSZ22a, RSZ22a | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g51941 | At-RSZ22a, RSZ22a | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g51942 | At-RSZ22a, RSZ22a | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g22621 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e022939_P001 | At-RSZ22a,... | RSZ21/22 RNA splicing factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004055 | argininosuccinate synthase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006525 | arginine metabolic process | IEP | HCCA |
| BP | GO:0006526 | arginine biosynthetic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| No external refs found! |
