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  5. AMTR_s00019p00211360

AMTR_s00019p00211360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.256

Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component


Gene families : OG0006357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006357_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00019p00211360

Target Alias Description ECC score Gene Family Method Actions
Adi_g014786 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Ehy_g20254 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Msp_g19861 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 63 89
IPR024977 Apc4_WD40_dom 12 57
IPR024790 APC4_long_dom 267 474
No external refs found!