AMTR_s00019p00240770 (VLN4, ATVLN4,...)

Aliases : VLN4, ATVLN4, evm_27.TU.AmTr_v1.0_scaffold00019.353

Description : Cytoskeleton.microfilament network.actin polymerisation.villin actin-crosslinking factor

Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00019p00240770

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_10436386g0010	ATVLN2, VLN2	villin actin-crosslinking factor	0.03	OrthoFinder output from all 47 species
Mp7g09750.1	ATVLN2, VLN2	villin actin-crosslinking factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	IEA	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003128	Villin_headpiece	926	961
IPR007123	Gelsolin-like_dom	29	111
IPR007123	Gelsolin-like_dom	640	709
IPR007123	Gelsolin-like_dom	406	482
IPR007123	Gelsolin-like_dom	150	216
IPR007123	Gelsolin-like_dom	270	337

External Links

No external refs found!