AMTR_s00020p00238060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00020.108

No description available


Gene families : OG0002164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00020p00238060
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Adi_g023443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G040000.1 Ceric.11G040000 not classified & original description: pacid=50595307... 0.02 OrthoFinder output from all 47 species
Ehy_g15975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003308001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01030507001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g68900.1 LOC_Os01g68900 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Mp1g27230.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g13747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002384 No alias not classified & original description: CDS=1-2250 0.05 OrthoFinder output from all 47 species
Solyc02g081180.2.1 Solyc02g081180 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!