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  5. AMTR_s00021p00151130

AMTR_s00021p00151130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.107

No description available


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00151130
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT1G33290 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT1G73170 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g108757 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02605 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07290 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18245 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15547 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71144.t1 SPD1, Aspi01Gene71144 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G016100.1 Ceric.08G016100 not classified & original description: pacid=50637973... 0.03 OrthoFinder output from all 47 species
Ceric.34G074300.1 SPD1, Ceric.34G074300 not classified & original description: pacid=50622982... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.19 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g05731 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10727 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g10640.1 LOC_Os12g10640 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10427944g0010 SPD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02253 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08814 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo410877 SPD1 No description available 0.05 OrthoFinder output from all 47 species
Solyc12g014150.3.1 Solyc12g014150 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e000530_P004 Zm00001e000530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011428_P004 SPD1, Zm00001e011428 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030045_P004 Zm00001e030045 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 91 177
No external refs found!