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  5. AMTR_s00021p00225580

AMTR_s00021p00225580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.218

Description : Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN cp-actin filament-bundling factor


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00225580
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G64500 No alias Glutaredoxin family protein 0.06 OrthoFinder output from all 47 species
Adi_g115568 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Ala_g13283 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Aob_g08420 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042605 No alias not classified & original description: CDS=1-1131 0.06 OrthoFinder output from all 47 species
Cba_g01999 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Cba_g33333 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G069000.1 Ceric.03G069000 actin filament-bundling factor *(THRUMIN) & original... 0.06 OrthoFinder output from all 47 species
Ceric.04G041800.1 Ceric.04G041800 not classified & original description: pacid=50632565... 0.03 OrthoFinder output from all 47 species
Ceric.20G051300.1 Ceric.20G051300 not classified & original description: pacid=50567468... 0.03 OrthoFinder output from all 47 species
Dac_g01599 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Dac_g39355 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Dde_g18247 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g30743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019562001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g13480.1 LOC_Os01g13480 actin filament-bundling factor (THRUMIN) 0.03 OrthoFinder output from all 47 species
Len_g30170 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g56975 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g01181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo116000 No alias Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN... 0.04 OrthoFinder output from all 47 species
Solyc08g082590.3.1 Solyc08g082590 actin filament-bundling factor (THRUMIN) 0.1 OrthoFinder output from all 47 species
Spa_g50389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21220 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e016368_P001 Zm00001e016368 actin filament-bundling factor (THRUMIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0015035 protein-disulfide reductase activity IEA Interproscan
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 243 309
No external refs found!