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  5. AMTR_s00021p00253210

AMTR_s00021p00253210 (HVA22F,...)


Aliases : HVA22F, evm_27.TU.AmTr_v1.0_scaffold00021.295

Description : HVA22-like protein f OS=Arabidopsis thaliana


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00253210
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT2G42820 HVA22F HVA22-like protein F 0.07 OrthoFinder output from all 47 species
Aop_g10178 ATHVA22A, HVA22A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31720 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G053300.1 HVA22F, Ceric.08G053300 not classified & original description: pacid=50637741... 0.02 OrthoFinder output from all 47 species
Ceric.08G072400.1 HVA22F, Ceric.08G072400 not classified & original description: pacid=50637758... 0.02 OrthoFinder output from all 47 species
Ceric.22G008400.1 HVA22F, Ceric.22G008400 not classified & original description: pacid=50614345... 0.03 OrthoFinder output from all 47 species
Dac_g12350 ATHVA22A, HVA22A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45965 ATHVA22A, HVA22A not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000808001 HVA22F HVA22-like protein f OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
GSVIVT01008026001 ATHVA22A, HVA22A HVA22-like protein a OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01008576001 HVA22E, ATHVA22E HVA22-like protein e OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01020012001 ATHVA22A, HVA22A HVA22-like protein a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_16303 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_113124g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_317474g0010 HVA22E, ATHVA22E no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_62010g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g05251 HVA22E, ATHVA22E not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09973 HVA22F not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37973 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00180 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10087 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04615 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g50646 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g014420.4.1 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 117.0) 0.01 OrthoFinder output from all 47 species
Solyc05g007300.3.1 HVA22C,... HVA22-like protein c OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g007820.3.1 HVA22F, Solyc10g007820 HVA22-like protein f OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Tin_g29763 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009930_P001 HVA22D,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 161.0) 0.03 OrthoFinder output from all 47 species
Zm00001e011109_P001 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 168.0) 0.04 OrthoFinder output from all 47 species
Zm00001e028216_P002 HVA22F, Zm00001e028216 HVA22-like protein f OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 14 98
No external refs found!