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  5. Aev_g05960

Aev_g05960


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g05960

Target Alias Description ECC score Gene Family Method Actions
AT5G53910 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G56340 ATCRT1 RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g020451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008897001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
MA_433917g0010 RHC1A Probable E3 ubiquitin-protein ligase RHC1A... 0.03 OrthoFinder output from all 47 species
MA_76949g0010 No alias E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_816375g0010 RHC1A Probable E3 ubiquitin-protein ligase RHC1A... 0.03 OrthoFinder output from all 47 species
Nbi_g02165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12284 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g00999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo8109 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc01g009000.3.1 RHC1A, Solyc01g009000 Probable E3 ubiquitin-protein ligase RHC1A... 0.02 OrthoFinder output from all 47 species
Solyc09g074460.3.1 CIP8, Solyc09g074460 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g10775 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e038199_P001 RHC1A, Zm00001e038199 Probable E3 ubiquitin-protein ligase RHC1A... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 34 74
IPR001841 Znf_RING 415 456
No external refs found!