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  5. AMTR_s00022p00198330

AMTR_s00022p00198330 (AtSPL9, SPL9,...)


Aliases : AtSPL9, SPL9, evm_27.TU.AmTr_v1.0_scaffold00022.228

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00198330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00211520 SPL4,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00106p00144050 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.03 OrthoFinder output from all 47 species
AT1G27360 SPL11 squamosa promoter-like 11 0.03 OrthoFinder output from all 47 species
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.04 OrthoFinder output from all 47 species
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.03 OrthoFinder output from all 47 species
AT2G42200 AtSPL9, SPL9 squamosa promoter binding protein-like 9 0.07 OrthoFinder output from all 47 species
Adi_g010861 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g104940 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10292 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38965 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22799 SPL13, SPL13A SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38390 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06099 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06796 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11381 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13927 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20948 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47133 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14528 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27599 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08472 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22380 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23632.t1 SPL8, Aspi01Gene23632 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26421.t1 SPL8, Aspi01Gene26421 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61092.t1 SPL8, Aspi01Gene61092 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67362.t1 Aspi01Gene67362 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0068.g036283 AtSPL9, SPL9 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043231 SPL2 SBP-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0147.g053031 SPL8 SBP-type transcription factor & original description: CDS=1-2847 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055767 SPL3 SBP-type transcription factor & original description: CDS=94-1491 0.03 OrthoFinder output from all 47 species
Azfi_s0213.g058306 SPL2 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g06624 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32859 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34343 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75896 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.11G073300.1 SPL8, Ceric.11G073300 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.20G021600.1 SPL2, Ceric.20G021600 SBP-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.20G077800.1 SPL3, Ceric.20G077800 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G013900.1 SPL8, Ceric.23G013900 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G007700.1 SPL2, Ceric.29G007700 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G052200.1 SPL8, Ceric.39G052200 SBP-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Cre02.g112750 No alias RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Dcu_g13420 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14927 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14928 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08477 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12026 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22348 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03805 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03904 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04651 SPL3 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05026 SPL8 SBP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g09070 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19323 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23373 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31810 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003836001 SPL12 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01018205001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01033064001 SPL13, SPL13A RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Gb_02576 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Gb_03922 SPL2 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Gb_15605 SPL8 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Gb_22010 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_27198 SPL2 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_32703 SPL10 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_38013 SPL2 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Gb_38014 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g46580.1 SPL3, LOC_Os04g46580 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os06g44860.1 SPL8, LOC_Os06g44860 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os07g32170.1 SPL4, LOC_Os07g32170 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
LOC_Os08g39890.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os08g41940.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31438.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
LOC_Os11g30370.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Len_g03838 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17980 SPL12 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41015 SPL3 SBP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Len_g48733 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02081 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05547 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14940 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428252g0010 SPL8 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435426g0010 AtSPL9, SPL9 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
MA_3179g0020 SPL8 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
MA_47367g0010 SPL8 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_92489g0010 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12140 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16004 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04942 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43554 SPL8 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15680 SPL8 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g30310 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32512 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43928 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01646 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45078 SPL7, ATSPL7 regulatory protein *(SPL7) of copper homeostasis &... 0.02 OrthoFinder output from all 47 species
Pir_g48099 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03154 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11944 SPL7, ATSPL7 regulatory protein *(SPL7) of copper homeostasis &... 0.03 OrthoFinder output from all 47 species
Ppi_g11404 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14602 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22224 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63266 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011736 SPL2 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025410 No alias SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026971 SPL8 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g14898 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30123 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo79699 SPL13, SPL13A RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Solyc02g077920.4.1 SPL3, Solyc02g077920 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Solyc05g015840.3.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Solyc07g062980.4.1 SPL3, Solyc07g062980 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Solyc10g018780.3.1 SPL8, Solyc10g018780 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Spa_g38145 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08757 SPL4 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32347 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006686_P001 SPL8, Zm00001e006686 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e010443_P001 SPL5, Zm00001e010443 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e013795_P002 SPL8, Zm00001e013795 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e025110_P001 SPL8, Zm00001e025110 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e028442_P002 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e034537_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e034628_P001 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e041822_P001 SPL8, Zm00001e041822 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 54 129
No external refs found!