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  5. AMTR_s00022p00220000

AMTR_s00022p00220000 (PGIP2, ATPGIP2,...)


Aliases : PGIP2, ATPGIP2, evm_27.TU.AmTr_v1.0_scaffold00022.271

Description : Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana


Gene families : OG0002518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00220000

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g01370.1 LOC_Os05g01370 pathogen polygalacturonase inhibitor (PGIP) 0.03 OrthoFinder output from all 47 species
Zm00001e007827_P001 ATPGIP1, PGIP1,... Polygalacturonase inhibitor OS=Vitis vinifera... 0.06 OrthoFinder output from all 47 species
Zm00001e029700_P001 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 145 181
IPR013210 LRR_N_plant-typ 32 68
No external refs found!