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  5. AMTR_s00022p00239310

AMTR_s00022p00239310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.337

Description : Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00239310

Target Alias Description ECC score Gene Family Method Actions
Cba_g05656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G010200.1 Ceric.33G010200 not classified & original description: pacid=50607367... 0.03 OrthoFinder output from all 47 species
Dcu_g06714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14283 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Ore_g02903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g061770.2.1 Solyc11g061770 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e034520_P001 Zm00001e034520 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 113 152
IPR002653 Znf_A20 14 38
No external refs found!