Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.395
No description available
Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00022p00252730 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G41990 | No alias | CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G08490 | No alias | BEST Arabidopsis thaliana protein match is: Late... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G24605 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g16993 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g15575 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07269 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g59912 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.24G024200.1 | Ceric.24G024200 | not classified & original description: pacid=50628716... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g00454 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g03465 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032090001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Gb_00802 | No alias | microtubule-interacting component CC of cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09110 | No alias | microtubule-interacting component CC of cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38619 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g59330.1 | LOC_Os04g59330 | microtubule-interacting component CC of cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10227167g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g12850.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g00420 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g20061 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g29304 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c16_7260V3.1 | Pp3c16_7260 | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g02766 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ppi_g62547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0086.g018396 | No alias | not classified & original description: CDS=285-692 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g087140.4.1 | Solyc01g087140 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007480_P002 | Zm00001e007480 | microtubule-interacting component CC of cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030085_P001 | Zm00001e030085 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
