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  5. AMTR_s00023p00071810

AMTR_s00023p00071810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.36

Description : GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana


Gene families : OG0000035 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00071810

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00247270 GLIP5,... GDSL esterase/lipase 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G24560 No alias GDSL-like Lipase/Acylhydrolase family protein 0.04 OrthoFinder output from all 47 species
AT3G04290 ATLTL1, LTL1 Li-tolerant lipase 1 0.03 OrthoFinder output from all 47 species
AT4G16230 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.06 OrthoFinder output from all 47 species
Aob_g19297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015012001 GLIP5 GDSL esterase/lipase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05399 GLIP6 GDSL esterase/lipase 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_05400 GLIP6 GDSL esterase/lipase 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g54470.1 LOC_Os01g54470 GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g40440.1 LOC_Os02g40440 cutin synthase (CD) 0.05 OrthoFinder output from all 47 species
LOC_Os06g05630.1 LOC_Os06g05630 GDSL esterase/lipase APG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g04624.1 LOC_Os09g04624 GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g32580.1 LOC_Os10g32580 cutin synthase (CD) 0.02 OrthoFinder output from all 47 species
MA_10428876g0010 No alias GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g22380.1 GLIP2 GDSL esterase/lipase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g09480.1 GLIP5 GDSL esterase/lipase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g05750.1 No alias GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g03750.1 No alias cutin synthase (CD) 0.03 OrthoFinder output from all 47 species
Solyc01g059840.3.1 Solyc01g059840 GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g090210.3.1 Solyc02g090210 GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g081780.3.1 Solyc04g081780 GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e003853_P001 Zm00001e003853 cutin synthase (CD) 0.03 OrthoFinder output from all 47 species
Zm00001e015777_P001 Zm00001e015777 GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027274_P001 Zm00001e027274 GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033722_P001 Zm00001e033722 GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 38 352
No external refs found!