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  5. AMTR_s00023p00136980

AMTR_s00023p00136980 (OPCL1,...)


Aliases : OPCL1, evm_27.TU.AmTr_v1.0_scaffold00023.76

Description : 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00136980

Target Alias Description ECC score Gene Family Method Actions
Aev_g45907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29974 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031500001 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_19726 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp1g04990.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Sam_g29127 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo181279 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g20791 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g46255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 1 129
No external refs found!