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  5. AMTR_s00024p00142420

AMTR_s00024p00142420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.91

No description available


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00142420
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Aob_g16554 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011877001 No alias Universal stress protein A-like protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_20328 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g19270.1 LOC_Os03g19270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g30150.1 LOC_Os10g30150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g02044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04229 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g11852 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 5 134
No external refs found!