AMTR_s00024p00233110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.254

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00233110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273020 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
AMTR_s00047p00138210 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.05 OrthoFinder output from all 47 species
AMTR_s00085p00122470 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G63730 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G72850 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT5G17680 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 OrthoFinder output from all 47 species
AT5G41540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT5G46490 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G51630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Adi_g019390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32850 LAZ5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24064 LAZ5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020980001 No alias External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
Gb_09197 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_20223 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_23545 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_30989 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_33268 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_33283 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10430493g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_10433845g0020 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_10435505g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_119183g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_365179g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_662972g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_7864385g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
MA_89787g0020 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_908452g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Pir_g25659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g30870 MEKK4, ATWRKY19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43673 No alias effector receptor *(NLR) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g52099 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55018 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g011350.3.1 Solyc11g011350 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000922 spindle pole IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006278 RNA-templated DNA biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 3 136
IPR001611 Leu-rich_rpt 615 633
IPR001611 Leu-rich_rpt 849 871
IPR025875 Leu-rich_rpt_4 755 790
IPR002182 NB-ARC 185 456
No external refs found!