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  5. AMTR_s00024p00245510

AMTR_s00024p00245510 (ATCCX4, CCX4,...)


Aliases : ATCCX4, CCX4, evm_27.TU.AmTr_v1.0_scaffold00024.305

Description : Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation:calcium cation exchanger (CCX-type)


Gene families : OG0000634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00245510

Target Alias Description ECC score Gene Family Method Actions
Adi_g018952 ATCCX4, CCX4 cation:calcium cation exchanger *(CCX) & original... 0.02 OrthoFinder output from all 47 species
Ceric.04G013400.1 CAX9, ATCCX3,... cation:calcium cation exchanger *(CCX) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g03819 ATCCX4, CCX4 cation:calcium cation exchanger *(CCX) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13338 ATCCX4, CCX4 cation:calcium cation exchanger *(CCX) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g04585 ATCAX11, CAX11 cation:calcium cation exchanger *(CCX) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g10261 ATCCX4, CCX4 cation:calcium cation exchanger *(CCX) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g006370.1.1 CAX7, Solyc07g006370 cation:calcium cation exchanger (CCX) 0.03 OrthoFinder output from all 47 species
Tin_g02046 ATCCX4, CCX4 cation:calcium cation exchanger *(CCX) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 523 664
IPR004837 NaCa_Exmemb 184 314
No external refs found!