AMTR_s00024p00245950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.307

No description available


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00245950

Target Alias Description ECC score Gene Family Method Actions
AT4G14819 No alias Protein of unknown function (DUF1677) 0.04 OrthoFinder output from all 47 species
AT5G25840 No alias Protein of unknown function (DUF1677) 0.05 OrthoFinder output from all 47 species
Adi_g058493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03922 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25095.t1 Aspi01Gene25095 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26438.t1 Aspi01Gene26438 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G033900.1 Ceric.33G033900 not classified & original description: pacid=50607113... 0.03 OrthoFinder output from all 47 species
LOC_Os01g10260.1 LOC_Os01g10260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g10310.1 LOC_Os01g10310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g13620.1 LOC_Os02g13620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g46300.1 LOC_Os03g46300 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g11300.1 LOC_Os05g11300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g09900.1 LOC_Os06g09900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_23866g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_94444g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g21272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g061270.1.1 Solyc08g061270 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g082190.1.1 Solyc09g082190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 32 121
No external refs found!