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  5. AMTR_s00025p00097820

AMTR_s00025p00097820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.79

Description : DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana


Gene families : OG0000554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00097820
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020943.43 No alias DUF21 domain-containing protein At5g52790 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre03.g171751 No alias DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
InterPro domains Description Start Stop
IPR002550 CNNM 39 202
No external refs found!