Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.221
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP3 component
Gene families : OG0003859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003859_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G25890 | No alias | 60S acidic ribosomal protein family | 0.17 | OrthoFinder output from all 47 species | |
| AT5G57290 | No alias | 60S acidic ribosomal protein family | 0.17 | OrthoFinder output from all 47 species | |
| Adi_g053256 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Adi_g124944 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g10658 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g35024 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g06587 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12760 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g41418 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Aspi01Gene65687.t1 | Aspi01Gene65687 | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0393.g067832 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g20552 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G014300.1 | Ceric.24G014300 | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g46270 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g46271 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g19693 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01010910001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.15 | OrthoFinder output from all 47 species | |
| Gb_31564 | No alias | component RPP3 of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os01g13080.1 | LOC_Os01g13080 | component RPP3 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g48780.1 | LOC_Os06g48780 | component RPP3 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| Len_g49119 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g58897 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g28349 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| MA_10431312g0020 | No alias | component RPP3 of LSU proteome component. component... | 0.15 | OrthoFinder output from all 47 species | |
| Mp3g07010.1 | No alias | component RPP3 of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| Msp_g00888 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01622 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g06464 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06465 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g18566 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c21_16160V3.1 | Pp3c21_16160 | 60S acidic ribosomal protein family | 0.09 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006166 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g24981 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Smo105823 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Solyc07g009330.4.1 | Solyc07g009330 | component RPP3 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
| Spa_g04803 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Spa_g17718 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Tin_g00251 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e013180_P001 | Zm00001e013180 | component RPP3 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005622 | intracellular anatomical structure | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006414 | translational elongation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | HCCA |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| CC | GO:0005758 | mitochondrial intermembrane space | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006825 | copper ion transport | IEP | HCCA |
| MF | GO:0016530 | metallochaperone activity | IEP | HCCA |
| MF | GO:0016531 | copper chaperone activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | HCCA |
| CC | GO:0031970 | organelle envelope lumen | IEP | HCCA |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043233 | organelle lumen | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0061134 | peptidase regulator activity | IEP | HCCA |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | HCCA |
| CC | GO:0070013 | intracellular organelle lumen | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
