AMTR_s00025p00209580 (SECE1,...)

Aliases : SECE1, evm_27.TU.AmTr_v1.0_scaffold00025.276

Description : Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component

Gene families : OG0007405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007405_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00025p00209580

Target	Alias	Description	ECC score	Gene Family Method
AT4G14870	SECE1	secE/sec61-gamma protein transport protein	0.03	OrthoFinder output from all 47 species
Ala_g05942	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Cre10.g457650	No alias	Protein translocation.chloroplast.thylakoid membrane...	0.04	OrthoFinder output from all 47 species
Nbi_g01748	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008344	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.02	OrthoFinder output from all 47 species
Spa_g07161	SECE1	component *(SecE1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Zm00001e036355_P002	SECE1, Zm00001e036355	component SecE1 of thylakoid membrane Sec1 translocation system	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006605	protein targeting	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001901	Translocase_SecE/Sec61-g	108	155

External Links

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