Aliases : ATHDA5, HDA05, HDA5
Description : class-II histone deacetylase & original description: none
Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g17859 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14691 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060221 | ATHDA15, HDA15 | class-II histone deacetylase & original description: CDS=93-1925 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15038 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g18820 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G070600.1 | ATHDA15, HDA15,... | class-II histone deacetylase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g06980.1 | ATHDA15, HDA15,... | class-II histone deacetylase | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g20110.1 | ATHDA15, HDA15 | class-II histone deacetylase | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16921 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009048 | ATHDA15, HDA15 | class-II histone deacetylase & original description: CDS=178-1890 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g49320 | No alias | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g08286 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007030 | Golgi organization | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 25 | 326 |
| No external refs found! |
