AMTR_s00025p00237300 (SCY2, EMB2289,...)

Aliases : SCY2, EMB2289, evm_27.TU.AmTr_v1.0_scaffold00025.355

Description : Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecY2 component

Gene families : OG0005693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005693_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00025p00237300

Target	Alias	Description	ECC score	Gene Family Method
Ceric.25G055200.1	SCY2, EMB2289,...	component *(SecY2) of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species
LOC_Os05g33020.1	SCY2, EMB2289,...	component SecY2 of inner envelope Sec2 post-import...	0.04	OrthoFinder output from all 47 species
Mp1g27500.1	SCY2, EMB2289	component SecY2 of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species
Ore_g29035	SCY2, EMB2289	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g27422	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008373	sialyltransferase activity	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002208	SecY/SEC61-alpha	224	565

External Links

No external refs found!