Aliases : evm_27.TU.AmTr_v1.0_scaffold00026.3
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL39 component
Gene families : OG0008672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008672_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0238.g059648 | No alias | component *(eL39) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17362 | No alias | component *(eL39) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01035913001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| MA_92282g0010 | No alias | component RPL39 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g26960.1 | No alias | component RPL39 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c15_14860V3.1 | Pp3c15_14860 | Ribosomal protein L39 family protein | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g010350.3.1 | Solyc12g010350 | component RPL39 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005622 | intracellular anatomical structure | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| CC | GO:0005787 | signal peptidase complex | IEP | HCCA |
| BP | GO:0006465 | signal peptide processing | IEP | HCCA |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000077 | Ribosomal_L39 | 9 | 50 |
| No external refs found! |
