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  5. AMTR_s00027p00248560

AMTR_s00027p00248560


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00027p00248560

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00250010 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g11657 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13166 No alias histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23279 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02728 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55695.t1 Aspi01Gene55695 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G051800.1 Ceric.14G051800 not classified & original description: pacid=50634871... 0.03 OrthoFinder output from all 47 species
Ceric.1Z177000.1 Ceric.1Z177000 histone *(H3) & original description: pacid=50628432... 0.03 OrthoFinder output from all 47 species
Ceric.37G016300.1 Ceric.37G016300 histone *(H3) & original description: pacid=50616425... 0.04 OrthoFinder output from all 47 species
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Dac_g14466 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18977 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31894 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006535001 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_113838g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.03 OrthoFinder output from all 47 species
Msp_g41988 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21010 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10157 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56178 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008160_P001 Zm00001e008160 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e018263_P001 Zm00001e018263 histone (H3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 58 132
No external refs found!