AMTR_s00028p00193460 (AHK2, HK2,...)

Aliases : AHK2, HK2, evm_27.TU.AmTr_v1.0_scaffold00028.85

Description : Phytohormones.cytokinin.perception and signal transduction.AHK-type receptor

Gene families : OG0000777 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000777_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00028p00193460

Target	Alias	Description	ECC score	Gene Family Method
AT5G35750	AHK2, HK2	histidine kinase 2	0.04	OrthoFinder output from all 47 species
Aev_g40213	HK3, AHK3	receptor protein *(AHK) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g15631	ATCRE1, WOL,...	receptor protein *(AHK) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g23830	HK3, AHK3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g31643	AHK2, HK2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g34518	HK3, AHK3	receptor protein *(AHK) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g36910	ATCRE1, WOL,...	receptor protein *(AHK) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g00160	HK3, AHK3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g44122	ATCRE1, WOL,...	receptor protein *(AHK) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007381	ATCRE1, WOL,...	receptor protein *(AHK) & original description: CDS=1-3423	0.02	OrthoFinder output from all 47 species
Solyc07g047770.4.1	AHK2, HK2, Solyc07g047770	receptor protein (AHK)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
MF	GO:0000156	phosphorelay response regulator activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
MF	GO:0008144	obsolete drug binding	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003594	HATPase_C	492	665
IPR003661	HisK_dim/P	380	445
IPR006189	CHASE_dom	95	293
IPR001789	Sig_transdc_resp-reg_receiver	844	976

External Links

No external refs found!

AMTR_s00028p00193460 (AHK2, HK2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation