AMTR_s00029p00110690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.118

No description available


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00110690
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT3G61500 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT4G11300 No alias Protein of unknown function (DUF793) 0.03 OrthoFinder output from all 47 species
Adi_g024370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11016 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g24073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08992.t1 Aspi01Gene08992 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_18309 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_18312 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_18313 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28868 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_85744g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g12016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!