AMTR_s00029p00123030 (RPS5,...)

Aliases : RPS5, evm_27.TU.AmTr_v1.0_scaffold00029.138

Description : Disease resistance protein RPS5 OS=Arabidopsis thaliana

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00029p00123030
Cluster	HCCA: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00126150	RPS5,...	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Aev_g22566	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g18971	ADR1-L2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01038446001	No alias	Probable disease resistance protein At1g52660...	0.06	OrthoFinder output from all 47 species
Gb_01300	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.03	OrthoFinder output from all 47 species
Gb_15873	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os12g10410.1	RPS2, LOC_Os12g10410	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_104304g0010	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10431079g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_322817g0010	No alias	Probable disease resistance protein At1g61190...	0.03	OrthoFinder output from all 47 species
MA_355252g0010	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_48202g0010	No alias	Probable disease resistance protein At5g63020...	0.05	OrthoFinder output from all 47 species
MA_5270774g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_8348g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Mp3g09150.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Pp3c19_2480V3.1	Pp3c19_2480	NB-ARC domain-containing disease resistance protein	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	27	160

External Links

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AMTR_s00029p00123030 (RPS5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation